Course Schedule—Fall 2007

Biophysics

Note: Text highlighted in red indicates that a change has been made to the course listing. The red text indicates the current, updated information.

BIOPHYSICS

250.131 (N)

TOPICS IN BIOPHYSICS RESEARCH (1) Fleming, K.  Limit 50  Freshmen and Sophomores only  Satisfactory/Unsatisfactory Only Discussion emphasized. Biophysics faculty present seminars on their current work or contemporary biophysics research.

Sec. 01

T 4-5:30pm

250.345 (N)

CELLULAR AND MOLECULAR PHYSIOLOGY (3) Cone   Limit 60
Prereq: 020.305   How cells and molecules function as parts of whole organisms. Topics include life cycles of molecules, cells and organisms, cellular and organismic circulatory systems, gas transport, sensory mechanisms, muscle and molecular motors, and virus host interactions.
Cross-listed with Biology and Neuroscience

Sec. 01

MTW 11

250.351 (N)

REPRODUCTIVE PHYSIOLOGY (2) Zirkin/Cone   Limit 120  Prereq: 020.305
Focuses on reproductive physiology and biochemical and molecular regulation of the female and male reproductive tracts. Topics include the hypothalamus and pituitary, peptide and steroid hormone action, epididymis and male accessory sex organs, female reproductive tract, menstrual cycle, ovulation and gamete transport, fertilization and fertility enhancement, sexually transmitted diseases, and male and female contraceptive methods. Introductory lectures on each topic followed by research-oriented lectures and readings from current literature.
Cross-listed with Biology

Sec. 01

W 4-5:45pm

250.353 (N)

COMPUTATIONAL BIOLOGY (3) Fleming, P.  Limit 15  Prereq: Biochemistry 020.305 and Organic Chemistry 030.205-206  This course introduces several computational approaches to the study of biological macromolecules.  Students will learn to use computational tools to analyze protein structure and to develop a basic understanding of computer programming.  The focus is biological rather than mathematical, and no programming experience is required. 

Sec. 01

ThF 1-2:30

250.391 (N)

INTRODUCTION TO UNIX/PYTHON & PROTEINS AND NUCLEIC ACIDS (3) Woodson/Bowman/Rose   Limit 35  Basic computing for biological applications. The structure of proteins, DNA, and RNA and their functions in living systems.  Experimental and theoretical approaches to macromolecules, including modeling, simulating and visualizing three-dimensional structures.

Sec. 01

TTh 10:30-12

250.519

INDEPENDENT STUDY

250.521

RESEARCH PROBLEMS

250.531

LABORATORY IN BIOPHYSICS
Permission from Faculty Sponsor   Introduction to Independent research in biophysics emphasizing basic laboratory techniques. Individual study arranged with faculty mentor.

250.601

BIOPHYSICS SEMINAR Cone
Perm. Req’d   First & Second year Biophysics Graduate students only
Students and invited speakers present current biophysics topics.

Sec. 01

M 4

250.631

LABORATORY RESEARCH IN BIOPHYSICS Staff  Limit 20
Biophysics research training.

Sec. 01

TBA

250.640

SEMINAR IN MUCOSAL PROTECTION Cone Limit 10 Physiology, immunology and epidemilogy of mucosal protection. Course added 6/29/07

Sec. 01

Th 11-12:30

250.673

SEMI-ANNUAL THESIS Fleming, K.  Biophysics Graduate students only
Once each term, advanced graduate students give a 10-minute presentation of their thesis work to the departmental faculty followed by a 30 minute discussion.

Sec. 01

TBA

250.683

INTRODUCTION TO UNIX PYTHON Rose  Limit 35  Two-week course, 9/11/07 – 9/20/07  Required for 250.685 Proteins and Nucleic Acids  Basic computing for biological applications.

Sec. 01

TTh 10:30-12

250.685

PROTEINS AND NUCLEIC ACIDS Woodson/Bowman/Rose   Limit 35    Prereq: 250.683   The structure of proteins, DNA, and RNA and their functions in living systems.  Experimental and theoretical approaches to macromolecules, including modeling, simulating and visualizing three-dimensional structures. Start date: 9/25/07

Sec. 01

TTh 10:30-12

250.689

PHYSICAL CHEMISTRY OF BIOLOGICAL MACROMOLECULES Garcia-Moreno   Limit 35   Introduction to the principles of thermodynamics and kinetics as applied to the study of the relationship between structure, energy dynamics, and biological function of proteins and nucleic acids. Topics include of classical, chemical, and statistical thermodynamics, kinetics, theory of ligand binding, and conformational equilibria.

Sec. 01

TTh 9-10:15

250.801

DISSERTATION RESEARCH

 

 

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